If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 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'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ), 'gf_id' => 'HOM05D000568', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000568' ), 'data_identifier' => 'HOM05D000568', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000568', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '974', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04980' => 'bna', 'A03p08920' => 'bna', 'A03p18460' => 'bna', 'A03p26100' => 'bna', 'A03p33140' => 'bna', 'A03p34660' => 'bna', 'A04p25340' => 'bna', 'A05p00160' => 'bna', 'A05p12700' => 'bna', 'A05p41620' => 'bna', 'A05p44290' => 'bna', 'A06p19210' => 'bna', 'A06p29970' => 'bna', 'A09p36780' => 'bna', 'A09p36800' => 'bna', 'A10p03470' => 'bna', 'A10p21010' => 'bna', 'Aa31LG11G11070' => 'aar', 'Aa31LG11G13110' => 'aar', 'Aa31LG1G18750' => 'aar', 'Aa31LG1G19780' => 'aar', 'Aa31LG1G29250' => 'aar', 'Aa31LG4G17020' => 'aar', 'Aa31LG5G13300' => 'aar', 'Aa31LG5G16930' => 'aar', 'Aa31LG5G4590' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.5256' => 'aag', 'Actinidia00046' => 'ach', 'Actinidia00685' => 'ach', 'Actinidia01946' => 'ach', 'Actinidia03591' => 'ach', 'Actinidia03592' => 'ach', 'Actinidia03829' => 'ach', 'Actinidia08851' => 'ach', 'Actinidia10793' => 'ach', 'Actinidia14311' => 'ach', 'Actinidia16196' => 'ach', 'Actinidia16197' => 'ach', 'Actinidia18428' => 'ach', 'Actinidia19377' => 'ach', 'Actinidia21069' => 'ach', 'Actinidia24846' => 'ach', 'Actinidia36781' => 'ach', 'Actinidia36782' => 'ach', 'Actinidia40246' => 'ach', 'Actinidia40247' => 'ach', 'Ah.04g158860' => 'amhyb', 'Ah.06g195520' => 'amhyb', 'Ah.13g066600' => 'amhyb', 'Ah.14g083110' => 'amhyb', 'Ah.15g093780' => 'amhyb', 'Ah.15g095400' => 'amhyb', 'AL1G14730' => 'aly', 'AL1G54780' => 'aly', 'AL39U10010' => 'aly', 'AL3G12240' => 'aly', 'AL3G17360' => 'aly', 'AL4G28450' => 'aly', 'AL4G47430' => 'aly', 'AL5G27850' => 'aly', 'AL6G27490' => 'aly', 'AL6G29820' => 'aly', 'AL8G40340' => 'aly', 'Aqoxy1G04175' => 'aox', 'Aqoxy2G03056' => 'aox', 'Aqoxy2G04063' => 'aox', 'Aqoxy3G01315' => 'aox', 'Aqoxy5G00672' => 'aox', 'Aqoxy5G03610' => 'aox', 'arahy.Tifrunner.gnm1.ann1.068H8T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.10SI56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.286K5M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LDH3N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3LKU2S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4047RD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WF1IF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.75ENLE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9GY8Y8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9WI7GI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FMR26E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FY4AR8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FZ17FK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G875QH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GT4GNB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IMB0BX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J2UR9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JPE2T4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQ68ST' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JS71GY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K799TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KWAB0D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7VI42' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MM94I9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MSPK9F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q92UBX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QT6MN3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RI5H0P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S50S0B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SUW3ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0VGDI' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UBL83T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UW2U2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X4GWKU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZG36KZ' => 'arhy', 'AT1G04990' => 'ath', 'AT1G48195' => 'ath', 'AT2G32930' => 'ath', 'AT2G47850' => 'ath', 'AT3G02830' => 'ath', 'AT3G06410' => 'ath', 'AT3G48440' => 'ath', 'AT5G16540' => 'ath', 'AT5G18550' => 'ath', 'AT5G63260' => 'ath', 'ATR0561G241' => 'atr', 'ATR0706G148' => 'atr', 'ATR0824G071' => 'atr', 'ATR1128G003' => 'atr', 'ATR1128G027' => 'atr', 'Atru.chr12.1796' => 'acertr', 'Atru.chr4.2791' => 'acertr', 'Atru.chr5.1247' => 'acertr', 'Atru.chr6.2469' => 'acertr', 'Atru.chr6.3267' => 'acertr', 'Atru.chr9.997' => 'acertr', 'AUR62000319' => 'cqu', 'AUR62001266' => 'cqu', 'AUR62004973' => 'cqu', 'AUR62006665' => 'cqu', 'AUR62008571' => 'cqu', 'AUR62025744' => 'cqu', 'AUR62034668' => 'cqu', 'AUR62043029' => 'cqu', 'AUR62043445' => 'cqu', 'BcaB01g00809' => 'bca', 'BcaB01g03947' => 'bca', 'BcaB01g04903' => 'bca', 'BcaB01g05266' => 'bca', 'BcaB02g08744' => 'bca', 'BcaB03g13462' => 'bca', 'BcaB03g14674' => 'bca', 'BcaB04g19385' => 'bca', 'BcaB04g21335' => 'bca', 'BcaB04g21402' => 'bca', 'BcaB05g23336' => 'bca', 'BcaB06g28642' => 'bca', 'BcaB07g32550' => 'bca', 'BcaB08g36663' => 'bca', 'BcaC01g02572' => 'bca', 'BcaC01g04427' => 'bca', 'BcaC01g05013' => 'bca', 'BcaC01g05873' => 'bca', 'BcaC02g07877' => 'bca', 'BcaC02g12540' => 'bca', 'BcaC03g13607' => 'bca', 'BcaC04g18668' => 'bca', 'BcaC05g24441' => 'bca', 'BcaC05g26982' => 'bca', 'BcaC05g29815' => 'bca', 'BcaC05g30029' => 'bca', 'BcaC05g30503' => 'bca', 'BcaC07g39330' => 'bca', 'BcaC09g47893' => 'bca', 'BcaNung04312' => 'bca', 'BcaNung06575' => 'bca', 'BcaNung06576' => 'bca', 'BcaNung07096' => 'bca', 'BcaNung07222' => 'bca', 'BNapus_Darmor_BZH_scaffold_118p00150' => 'bna', 'BNapus_Darmor_BZH_scaffold_122p00290' => 'bna', 'BNapus_Darmor_BZH_scaffold_99p00310' => 'bna', 'BolC1t05623H' => 'bol', 'BolC1t05869H' => 'bol', 'BolC2t06903H' => 'bol', 'BolC3t13520H' => 'bol', 'BolC3t14540H' => 'bol', 'BolC3t15460H' => 'bol', 'BolC3t16297H' => 'bol', 'BolC3t16493H' => 'bol', 'BolC3t18586H' => 'bol', 'BolC4t21655H' => 'bol', 'BolC4t23213H' => 'bol', 'BolC4t27717H' => 'bol', 'BolC5t29098H' => 'bol', 'BolC5t31565H' => 'bol', 'BolC5t34740H' => 'bol', 'BolC5t35062H' => 'bol', 'BolC7t42099H' => 'bol', 'BolC7t42101H' => 'bol', 'BolC8t49974H' => 'bol', 'BolC9t53838H' => 'bol', 'BolC9t58660H' => 'bol', 'BraA01t04440Z' => 'bra', 'BraA01t04613Z' => 'bra', 'BraA02t05457Z' => 'bra', 'BraA03t10218Z' => 'bra', 'BraA03t11107Z' => 'bra', 'BraA03t11825Z' => 'bra', 'BraA03t12484Z' => 'bra', 'BraA03t12643Z' => 'bra', 'BraA04t18037Z' => 'bra', 'BraA05t19012Z' => 'bra', 'BraA05t20209Z' => 'bra', 'BraA05t22881Z' => 'bra', 'BraA06t23285Z' => 'bra', 'BraA06t25005Z' => 'bra', 'BraA06t25948Z' => 'bra', 'BraA09t39194Z' => 'bra', 'BraA09t39196Z' => 'bra', 'BraA09t39197Z' => 'bra', 'BraA10t42623Z' => 'bra', 'BraA10t44165Z' => 'bra', 'C02p10010' => 'bna', 'C03p10400' => 'bna', 'C03p21550' => 'bna', 'C03p31130' => 'bna', 'C03p40320' => 'bna', 'C03p42130' => 'bna', 'C03p63330' => 'bna', 'C04p00080' => 'bna', 'C04p16630' => 'bna', 'C04p62420' => 'bna', 'C05p03180' => 'bna', 'C05p60830' => 'bna', 'C08p23460' => 'bna', 'C09p57930' => 'bna', 'C09p75950' => 'bna', 'CAN.G1046.2' => 'can', 'CAN.G1177.12' => 'can', 'CAN.G1351.1' => 'can', 'CAN.G1492.6' => 'can', 'CAN.G2016.1' => 'can', 'CAN.G2016.2' => 'can', 'CAN.G223.22' => 'can', 'CAN.G256.19' => 'can', 'CAN.G472.43' => 'can', 'CANSAT54G1162' => 'cansat', 'CANSAT78G0628' => 'cansat', 'CANSAT78G2381' => 'cansat', 'CANSAT80G2497' => 'cansat', 'CARHR004410' => 'chi', 'CARHR076840' => 'chi', 'CARHR080940' => 'chi', 'CARHR126860' => 'chi', 'CARHR143250' => 'chi', 'CARHR157200' => 'chi', 'CARHR194470' => 'chi', 'CARHR277110' => 'chi', 'Carub.0001s0424' => 'cru', 'Carub.0001s3727' => 'cru', 'Carub.0001s3728' => 'cru', 'Carub.0003s0193' => 'cru', 'Carub.0003s0585' => 'cru', 'Carub.0004s1436' => 'cru', 'Carub.0004s3056' => 'cru', 'Carub.0005s1462' => 'cru', 'Carub.0006s1474' => 'cru', 'Carub.0006s1682' => 'cru', 'Carub.0008s2401' => 'cru', 'Ca_00555_v3' => 'car', 'Ca_05568_v3' => 'car', 'Ca_06055_v3' => 'car', 'Ca_07974_v3' => 'car', 'Ca_10358_v3' => 'car', 'Ca_16096_v3' => 'car', 'Ca_21535_v3' => 'car', 'Ca_30075_v3' => 'car', 'CBR_g28558' => 'cbr', 'CBR_g5575' => 'cbr', 'CBR_g9045' => 'cbr', 'Cc01_g20430' => 'ccan', 'Cc03_g02100' => 'ccan', 'Cc03_g13820' => 'ccan', 'Cc04_g10560' => 'ccan', 'Cc05_g02720' => 'ccan', 'Cc07_g00280' => 'ccan', 'Cc09_g03550' => 'ccan', 'CDE02G0366' => 'cde', 'CDE02G2491' => 'cde', 'CDE02G3195' => 'cde', 'CDE05G1779' => 'cde', 'CDE05G1814' => 'cde', 'CDE06G1026' => 'cde', 'CDE09G0575' => 'cde', 'CDE09G1328' => 'cde', 'CDE11G0784' => 'cde', 'Cfa005997' => 'cfa', 'Cfa006270' => 'cfa', 'Cfa014309' => 'cfa', 'Cfa015365' => 'cfa', 'Cfa018900' => 'cfa', 'Ciclev10003110m.g' => 'ccl', 'Ciclev10004882m.g' => 'ccl', 'Ciclev10011741m.g' => 'ccl', 'Ciclev10015215m.g' => 'ccl', 'Ciclev10019968m.g' => 'ccl', 'Ciclev10019979m.g' => 'ccl', 'CiPaw.01G150900' => 'cil', 'CiPaw.02G084700' => 'cil', 'CiPaw.03G154300' => 'cil', 'CiPaw.04G109400' => 'cil', 'CiPaw.07G079600' => 'cil', 'CiPaw.07G102500' => 'cil', 'CiPaw.08G099400' => 'cil', 'CiPaw.08G115800' => 'cil', 'CiPaw.11G013000' => 'cil', 'CiPaw.11G013100' => 'cil', 'CiPaw.12G034800' => 'cil', 'ClCG02G018110' => 'cla', 'ClCG03G003420' => 'cla', 'ClCG03G010840' => 'cla', 'ClCG05G005940' => 'cla', 'COL.COLO4_06742' => 'col', 'COL.COLO4_08006' => 'col', 'COL.COLO4_08506' => 'col', 'COL.COLO4_13903' => 'col', 'COL.COLO4_27387' => 'col', 'COL.COLO4_29240' => 'col', 'Cpa.g.sc16.149' => 'cpa', 'Cpa.g.sc346.1' => 'cpa', 'Cpa.g.sc39.3' => 'cpa', 'Cpa.g.sc4.50' => 'cpa', 'Cpa.g.sc9.186' => 'cpa', 'Cre16.g689535' => 'cre', 'CsaV3_1G009210' => 'csa', 'CsaV3_1G044580' => 'csa', 'CsaV3_3G014330' => 'csa', 'CsaV3_6G015470' => 'csa', 'CSS0001228' => 'camsi', 'CSS0004010' => 'camsi', 'CSS0012695' => 'camsi', 'CSS0016477' => 'camsi', 'CSS0016938' => 'camsi', 'CSS0019224' => 'camsi', 'CSS0035731' => 'camsi', 'CSS0038128' => 'camsi', 'CSS0047511' => 'camsi', 'CSS0049456' => 'camsi', 'DCAR_002800' => 'dca', 'DCAR_005817' => 'dca', 'DCAR_005818' => 'dca', 'DCAR_012917' => 'dca', 'DCAR_019255' => 'dca', 'DCAR_022797' => 'dca', 'DCAR_024556' => 'dca', 'DCAR_027091' => 'dca', 'DCAR_027092' => 'dca', 'DCAR_028579' => 'dca', 'DCAR_031600' => 'dca', 'Dinv06978' => 'din', 'Dinv08711' => 'din', 'Dinv29110' => 'din', 'Dinv33013' => 'din', 'Dinv33396' => 'din', 'Dinv38308' => 'din', 'Dinv38482' => 'din', 'Dinv39758' => 'din', 'Dinv44403' => 'din', 'Duzib052G0047' => 'dzi', 'Duzib068G0071' => 'dzi', 'Duzib128G0444' => 'dzi', 'Duzib133G0182' => 'dzi', 'Duzib138G0246' => 'dzi', 'Duzib138G0737' => 'dzi', 'Duzib147G0413' => 'dzi', 'Duzib151G0369' => 'dzi', 'Duzib205G0872' => 'dzi', 'Duzib211G0431' => 'dzi', 'Duzib212G0724' => 'dzi', 'ECA232G1415' => 'eca', 'ECA232G2670' => 'eca', 'ECA236G2045' => 'eca', 'ECA238G1103' => 'eca', 'ECA240G1663' => 'eca', 'ECA240G2233' => 'eca', 'ECA246G2417' => 'eca', 'ECA248G0940' => 'eca', 'EL10Ac3g06583' => 'bvu', 'EL10Ac4g09168' => 'bvu', 'EL10Ac4g09976' => 'bvu', 'EL10Ac7g17428' => 'bvu', 'EL10Ac7g18057' => 'bvu', 'EL10Ac9g22822' => 'bvu', 'Eucgr.B00161' => 'egr', 'Eucgr.B01280' => 'egr', 'Eucgr.B01407' => 'egr', 'Eucgr.H01196' => 'egr', 'Eucgr.H03871' => 'egr', 'Eucgr.H03872' => 'egr', 'Eucgr.I01702' => 'egr', 'FAN02G1058' => 'fan', 'FAN02G1199' => 'fan', 'FAN04G2566' => 'fan', 'FAN05G0912' => 'fan', 'FAN05G2012' => 'fan', 'FAN07G1518' => 'fan', 'FAN08G3332' => 'fan', 'FAN09G0511' => 'fan', 'FAN09G0846' => 'fan', 'FAN12G0132' => 'fan', 'FAN12G0371' => 'fan', 'FAN13G1895' => 'fan', 'FAN14G0348' => 'fan', 'FAN14G5758' => 'fan', 'FAN15G1036' => 'fan', 'FAN17G0266' => 'fan', 'FAN18G1970' => 'fan', 'FAN20G2496' => 'fan', 'FAN22G0784' => 'fan', 'FAN24G0913' => 'fan', 'FAN27G1623' => 'fan', 'FvH4_2g24990' => 'fve', 'FvH4_4g17640' => 'fve', 'FvH4_5g07100' => 'fve', 'FvH4_6g00570' => 'fve', 'FvH4_6g42010' => 'fve', 'Glyma.02G153600' => 'gma', 'Glyma.02G153700' => 'gma', 'Glyma.02G267500' => 'gma', 'Glyma.04G192100' => 'gma', 'Glyma.05G044300' => 'gma', 'Glyma.06G173700' => 'gma', 'Glyma.07G250000' => 'gma', 'Glyma.09G251200' => 'gma', 'Glyma.10G020600' => 'gma', 'Glyma.10G020700' => 'gma', 'Glyma.10G170800' => 'gma', 'Glyma.13G217000' => 'gma', 'Glyma.14G050000' => 'gma', 'Glyma.15G095500' => 'gma', 'Glyma.17G024400' => 'gma', 'Glyma.17G126800' => 'gma', 'Glyma.18G241300' => 'gma', 'Glyma.20G219100' => 'gma', 'Gohir.A01G026400' => 'ghi', 'Gohir.A02G047700' => 'ghi', 'Gohir.A05G391200' => 'ghi', 'Gohir.A07G053900' => 'ghi', 'Gohir.A07G084900' => 'ghi', 'Gohir.A07G085100' => 'ghi', 'Gohir.A07G168300' => 'ghi', 'Gohir.A08G043700' => 'ghi', 'Gohir.A08G073500' => 'ghi', 'Gohir.A08G224800' => 'ghi', 'Gohir.A09G031900' => 'ghi', 'Gohir.A10G162500' => 'ghi', 'Gohir.A11G035100' => 'ghi', 'Gohir.A11G116700' => 'ghi', 'Gohir.A12G009500' => 'ghi', 'Gohir.A12G187600' => 'ghi', 'Gohir.A13G154400' => 'ghi', 'Gohir.D01G023433' => 'ghi', 'Gohir.D02G052900' => 'ghi', 'Gohir.D04G026000' => 'ghi', 'Gohir.D07G058300' => 'ghi', 'Gohir.D07G090400' => 'ghi', 'Gohir.D07G090600' => 'ghi', 'Gohir.D07G174900' => 'ghi', 'Gohir.D08G053300' => 'ghi', 'Gohir.D08G082900' => 'ghi', 'Gohir.D08G245200' => 'ghi', 'Gohir.D09G032000' => 'ghi', 'Gohir.D10G168900' => 'ghi', 'Gohir.D11G038700' => 'ghi', 'Gohir.D11G121800' => 'ghi', 'Gohir.D12G009500' => 'ghi', 'Gohir.D12G190550' => 'ghi', 'Gohir.D13G159100' => 'ghi', 'Gorai.001G061800' => 'gra', 'Gorai.001G096900' => 'gra', 'Gorai.001G097100' => 'gra', 'Gorai.001G195600' => 'gra', 'Gorai.002G027000' => 'gra', 'Gorai.004G053200' => 'gra', 'Gorai.004G086700' => 'gra', 'Gorai.004G261700' => 'gra', 'Gorai.005G058800' => 'gra', 'Gorai.006G036900' => 'gra', 'Gorai.007G041600' => 'gra', 'Gorai.007G130500' => 'gra', 'Gorai.008G009500' => 'gra', 'Gorai.008G204400' => 'gra', 'Gorai.011G188400' => 'gra', 'Gorai.012G028600' => 'gra', 'Gorai.013G179800' => 'gra', 'GSVIVG01003977001' => 'vvi', 'GSVIVG01007563001' => 'vvi', 'GSVIVG01010980001' => 'vvi', 'GSVIVG01017774001' => 'vvi', 'GSVIVG01019118001' => 'vvi', 'GSVIVG01019119001' => 'vvi', 'GSVIVG01023544001' => 'vvi', 'GSVIVG01030514001' => 'vvi', 'HanXRQChr01g0001611' => 'han', 'HanXRQChr02g0039631' => 'han', 'HanXRQChr03g0079421' => 'han', 'HanXRQChr06g0173811' => 'han', 'HanXRQChr09g0255691' => 'han', 'HanXRQChr09g0258021' => 'han', 'HanXRQChr09g0272801' => 'han', 'HanXRQChr16g0497961' => 'han', 'HanXRQChr16g0506521' => 'han', 'HanXRQChr17g0536101' => 'han', 'HanXRQChr17g0559161' => 'han', 'Haze_01241' => 'cav', 'Haze_04544' => 'cav', 'Haze_04545' => 'cav', 'Haze_04844' => 'cav', 'Haze_07286' => 'cav', 'Haze_12757' => 'cav', 'Hma1.2p1_0001F.1_g001610' => 'hma', 'Hma1.2p1_0007F.1_g005040' => 'hma', 'Hma1.2p1_0014F.1_g010050' => 'hma', 'Hma1.2p1_0123F.1_g057910' => 'hma', 'Hma1.2p1_0279F.1_g112100' => 'hma', 'Hma1.2p1_0399F.1_g144030' => 'hma', 'Hma1.2p1_0555F.1_g178030' => 'hma', 'Hma1.2p1_0698F.1_g205386' => 'hma', 'Hma1.2p1_0698F.1_g205389' => 'hma', 'Hma1.2p1_0704F.1_g206560' => 'hma', 'Hma1.2p1_0992F.1_g245145' => 'hma', 'Hma1.2p1_1125F.1_g259600' => 'hma', 'Hma1.2p1_2251F.1_g318080' => 'hma', 'Hma1.2p1_2251F.1_g318090' => 'hma', 'Hma1.2p1_2477F.1_g322910' => 'hma', 'Hma1.2p1_2983F.1_g331265' => 'hma', 'HPP92_003057' => 'vpl', 'HPP92_003544' => 'vpl', 'HPP92_011783' => 'vpl', 'HPP92_011837' => 'vpl', 'HPP92_013709' => 'vpl', 'HPP92_019921' => 'vpl', 'HPP92_026822' => 'vpl', 'Hund05395' => 'sun', 'Hund07338' => 'sun', 'Hund18534' => 'sun', 'Hund21513' => 'sun', 'Hund21897' => 'sun', 'Hund28604' => 'sun', 'Hund28607' => 'sun', 'Hund29128' => 'sun', 'Hund29137' => 'sun', 'Lalb_Chr02g0149441' => 'lal', 'Lalb_Chr04g0250111' => 'lal', 'Lalb_Chr04g0259751' => 'lal', 'Lalb_Chr07g0177611' => 'lal', 'Lalb_Chr07g0177621' => 'lal', 'Lalb_Chr10g0105551' => 'lal', 'Lalb_Chr12g0196511' => 'lal', 'Lalb_Chr12g0202081' => 'lal', 'Lalb_Chr13g0303741' => 'lal', 'Lalb_Chr15g0086941' => 'lal', 'Lalb_Chr17g0347221' => 'lal', 'Lalb_Chr18g0047311' => 'lal', 'Lalb_Chr18g0055591' => 'lal', 'Lalb_Chr20g0118041' => 'lal', 'Lalb_Chr21g0311441' => 'lal', 'Lj1A36G48' => 'lonja', 'Lj1A783T51' => 'lonja', 'Lj1C36G1' => 'lonja', 'Lj1g0006041' => 'lja', 'Lj1g0028025' => 'lja', 'Lj2A1187G54' => 'lonja', 'Lj2A1187T56' => 'lonja', 'Lj3A814G55' => 'lonja', 'Lj4g0003109' => 'lja', 'Lj4g0012486' => 'lja', 'Lj5A101T106' => 'lonja', 'Lj5g0005422' => 'lja', 'Lj5g0010452' => 'lja', 'Lj6A671T65' => 'lonja', 'Lj6g0021188' => 'lja', 'Lj7C604G9' => 'lonja', 'Lj8A196T47' => 'lonja', 'Lj8C130T9' => 'lonja', 'LjContig00029g0004690' => 'lja', 'Lsat_1_v5_gn_3_24160' => 'lsa', 'Lsat_1_v5_gn_4_184801' => 'lsa', 'Lsat_1_v5_gn_4_76400' => 'lsa', 'Lsat_1_v5_gn_5_184121' => 'lsa', 'Lsat_1_v5_gn_5_189400' => 'lsa', 'Lsat_1_v5_gn_5_52221' => 'lsa', 'Lsat_1_v5_gn_7_95260' => 'lsa', 'Lsat_1_v5_gn_9_106160' => 'lsa', 'Lsat_1_v5_gn_9_48840' => 'lsa', 'Manes.01G215400' => 'mes', 'Manes.03G192500' => 'mes', 'Manes.05G066400' => 'mes', 'Manes.06G114200' => 'mes', 'Manes.08G104100' => 'mes', 'Manes.09G185200' => 'mes', 'Manes.10G114139' => 'mes', 'Manes.12G069000' => 'mes', 'Manes.13G065500' => 'mes', 'Manes.14G055800' => 'mes', 'Manes.15G014500' => 'mes', 'Mapoly0023s0030' => 'mpo', 'MBI06_g36246_MAGBIO' => 'mbi', 'MBI11_g07421_MAGBIO' => 'mbi', 'MBI18_g01956_MAGBIO' => 'mbi', 'MBI19_g03675_MAGBIO' => 'mbi', 'MBI19_g47701_MAGBIO' => 'mbi', 'MD03G1135600' => 'mdo', 'MD03G1278900' => 'mdo', 'MD03G1279200' => 'mdo', 'MD03G1279700' => 'mdo', 'MD03G1279800' => 'mdo', 'MD03G1280300' => 'mdo', 'MD03G1280400' => 'mdo', 'MD04G1244100' => 'mdo', 'MD05G1053000' => 'mdo', 'MD06G1100700' => 'mdo', 'MD06G1158800' => 'mdo', 'MD06G1159000' => 'mdo', 'MD06G1159200' => 'mdo', 'MD09G1115400' => 'mdo', 'MD10G1110500' => 'mdo', 'MD11G1301200' => 'mdo', 'MD12G1259900' => 'mdo', 'MD13G1171100' => 'mdo', 'MD14G1165100' => 'mdo', 'MD14G1165300' => 'mdo', 'MD14G1165400' => 'mdo', 'MD14G1165500' => 'mdo', 'MD16G1172700' => 'mdo', 'MD17G1107000' => 'mdo', 'Medtr1g078270' => 'mtr', 'Medtr1g088875' => 'mtr', 'Medtr1g088880' => 'mtr', 'Medtr2g019740' => 'mtr', 'Medtr3g075190' => 'mtr', 'Medtr4g104260' => 'mtr', 'Medtr4g119280' => 'mtr', 'Medtr5g085200' => 'mtr', 'Medtr7g079840' => 'mtr', 'MELO3C002328.2' => 'cme', 'MELO3C006627.2' => 'cme', 'MELO3C010064.2' => 'cme', 'MELO3C019730.2' => 'cme', 'Migut.D00164' => 'egut', 'Migut.D01307' => 'egut', 'Migut.F01877' => 'egut', 'Migut.G00186' => 'egut', 'Migut.G00275' => 'egut', 'Migut.H00041' => 'egut', 'Migut.H01247' => 'egut', 'Migut.I00264' => 'egut', 'Migut.N00107' => 'egut', 'MSTRG.10081' => 'ama', 'MSTRG.11300' => 'ama', 'MSTRG.14130' => 'ama', 'MSTRG.14864' => 'ama', 'MSTRG.21605' => 'ama', 'MSTRG.21806' => 'ama', 'MSTRG.325' => 'ama', 'MSTRG.3935' => 'ama', 'MSTRG.4585' => 'ama', 'MSTRG.8215' => 'ama', 'Nitab4.5_0000003g0920' => 'nta', 'Nitab4.5_0000644g0190' => 'nta', 'Nitab4.5_0000784g0120' => 'nta', 'Nitab4.5_0001102g0060' => 'nta', 'Nitab4.5_0001308g0180' => 'nta', 'Nitab4.5_0001360g0110' => 'nta', 'Nitab4.5_0001459g0050' => 'nta', 'Nitab4.5_0001653g0090' => 'nta', 'Nitab4.5_0002006g0100' => 'nta', 'Nitab4.5_0002148g0020' => 'nta', 'Nitab4.5_0002233g0030' => 'nta', 'Nitab4.5_0002531g0090' => 'nta', 'Nitab4.5_0006333g0050' => 'nta', 'Nitab4.5_0006639g0130' => 'nta', 'Nitab4.5_0009013g0030' => 'nta', 'Nitab4.5_0011656g0010' => 'nta', 'Nn1g03365' => 'nnu', 'Nn1g07315' => 'nnu', 'Nn1g09782' => 'nnu', 'Nn1g09792' => 'nnu', 'Nn1g09814' => 'nnu', 'Nn3g21373' => 'nnu', 'Nn4g22483' => 'nnu', 'Nn4g25954' => 'nnu', 'Oeu011584.2' => 'oeu', 'Oeu021112.1' => 'oeu', 'Oeu026305.1' => 'oeu', 'Oeu030147.1' => 'oeu', 'Oeu040497.1' => 'oeu', 'Oeu044778.1' => 'oeu', 'Oeu047468.1' => 'oeu', 'Oeu048076.2' => 'oeu', 'Oeu053511.1' => 'oeu', 'Oeu054657.1' => 'oeu', 'Oeu062053.1' => 'oeu', 'Oeu062901.3' => 'oeu', 'Os01g0257400' => 'osa', 'Os01g0258700' => 'osa', 'Os01g0917400' => 'osa', 'Os11g0472000' => 'osa', 'Os12g0129550' => 'osa', 'Os12g0278800' => 'osa', 'Os12g0405100' => 'osa', 'Peaxi162Scf00033g01322' => 'pax', 'Peaxi162Scf00067g02114' => 'pax', 'Peaxi162Scf00089g00842' => 'pax', 'Peaxi162Scf00253g00721' => 'pax', 'Peaxi162Scf00344g01114' => 'pax', 'Peaxi162Scf00386g00511' => 'pax', 'Peaxi162Scf00572g00008' => 'pax', 'Peaxi162Scf00763g00337' => 'pax', 'PGR004G0077' => 'pgr', 'PGR031G1639' => 'pgr', 'PGR031G3440' => 'pgr', 'PGR044G2114' => 'pgr', 'PGR083G1817' => 'pgr', 'PGR119G1099' => 'pgr', 'PGR119G1524' => 'pgr', 'PGR142G2317' => 'pgr', 'PGSC0003DMG400005333' => 'stu', 'PGSC0003DMG400010434' => 'stu', 'PGSC0003DMG400011383' => 'stu', 'PGSC0003DMG400015168' => 'stu', 'PGSC0003DMG400016236' => 'stu', 'PGSC0003DMG400022651' => 'stu', 'PGSC0003DMG400030758' => 'stu', 'PGSC0003DMG400042570' => 'stu', 'PGSC0003DMG402027067' => 'stu', 'Phvul.003G102600' => 'pvu', 'Phvul.003G207900' => 'pvu', 'Phvul.006G163300' => 'pvu', 'Phvul.007G118500' => 'pvu', 'Phvul.007G165200' => 'pvu', 'Phvul.008G054800' => 'pvu', 'Phvul.008G214600' => 'pvu', 'Phvul.009G169600' => 'pvu', 'Potri.002G223700' => 'ptr', 'Potri.008G215700' => 'ptr', 'Potri.010G022500' => 'ptr', 'Potri.012G092500' => 'ptr', 'Potri.013G086800' => 'ptr', 'Potri.014G159500' => 'ptr', 'Potri.015G089100' => 'ptr', 'Potri.018G108850' => 'ptr', 'Potri.019G053200' => 'ptr', 'Pp3c26_12270' => 'ppa', 'Pp3c26_12400' => 'ppa', 'Pp3c4_29750' => 'ppa', 'PRCOL_00006332' => 'pco', 'Prupe.1G139500' => 'ppe', 'Prupe.3G209200' => 'ppe', 'Prupe.5G158300' => 'ppe', 'Prupe.5G158500' => 'ppe', 'Prupe.5G158600' => 'ppe', 'Prupe.5G158900' => 'ppe', 'Prupe.5G159000' => 'ppe', 'Prupe.5G159100' => 'ppe', 'Prupe.6G360600' => 'ppe', 'Prupe.8G254900' => 'ppe', 'Psat0ss1306g0040' => 'psa', 'Psat1g190000' => 'psa', 'Psat3g103720' => 'psa', 'Psat4g028360' => 'psa', 'Psat4g064560' => 'psa', 'Psat5g141360' => 'psa', 'Psat6g167080' => 'psa', 'PSO017G3594' => 'pso', 'PSO017G6110' => 'pso', 'PSO063G3831' => 'pso', 'PSO170G1512' => 'pso', 'PSO210G1296' => 'pso', 'PSO210G5719' => 'pso', 'PSO210G7315' => 'pso', 'PSO478G4865' => 'pso', 'PSO541G5865' => 'pso', 'PSO675G2685' => 'pso', 'PSO675G7507' => 'pso', 'PSO782G0187' => 'pso', 'PSO832G1313' => 'pso', 'PSO832G1473' => 'pso', 'QL01p048758' => 'qlo', 'QL06p008078' => 'qlo', 'QL08p030366' => 'qlo', 'QL10p005500' => 'qlo', 'QL12p024472' => 'qlo', 'RcHm_v2.0_Chr2g0157941' => 'rch', 'RcHm_v2.0_Chr3g0447961' => 'rch', 'RcHm_v2.0_Chr4g0421561' => 'rch', 'RcHm_v2.0_Chr6g0292971' => 'rch', 'RcHm_v2.0_Chr7g0191441' => 'rch', 'Rhsim02G0012300' => 'rsi', 'Rhsim04G0047500' => 'rsi', 'Rhsim04G0048700' => 'rsi', 'Rhsim04G0049500' => 'rsi', 'Rhsim04G0218900' => 'rsi', 'Rhsim06G0168600' => 'rsi', 'Rhsim08G0047000' => 'rsi', 'Rhsim08G0183400' => 'rsi', 'Rhsim09G0129700' => 'rsi', 'Rhsim12G0171400' => 'rsi', 'Rhsim13G0015800' => 'rsi', 'RhsimUnG0150900' => 'rsi', 'Sabra02G0171300' => 'sbr', 'Sabra08G0155300' => 'sbr', 'Sabra10G0015800' => 'sbr', 'Sabra12G0067200' => 'sbr', 'Sabra13G0077100' => 'sbr', 'Sabra14G0121200' => 'sbr', 'Sabra15G0111800' => 'sbr', 'Sabra19G0062700' => 'sbr', 'SalBow1G0558' => 'sbo', 'SalBow1G1803' => 'sbo', 'SalBow1G4383' => 'sbo', 'SalBow3G4244' => 'sbo', 'SalBow5G5080' => 'sbo', 'SalBow6G1599' => 'sbo', 'Sc03g0007160' => 'sci', 'Sc09g0001510' => 'sci', 'Sc12g0002050' => 'sci', 'Sc17g0003470' => 'sci', 'Sc19g0005030' => 'sci', 'Sc21g0001110' => 'sci', 'Sc22g0004200' => 'sci', 'Sc24g0003890' => 'sci', 'Sed0002919' => 'sed', 'Sed0003283' => 'sed', 'Sed0010716' => 'sed', 'Sed0011474' => 'sed', 'Sed0013686' => 'sed', 'Sed0013782' => 'sed', 'Sed0021120' => 'sed', 'Sed0021353' => 'sed', 'SEGI_00147' => 'sgi', 'SEGI_06685' => 'sgi', 'SEGI_20008' => 'sgi', 'SEGI_31366' => 'sgi', 'SEGI_40323' => 'sgi', 'SEGI_40707' => 'sgi', 'SGA_v2.0_scaffold122G33175' => 'sas', 'SGA_v2.0_scaffold172G39023' => 'sas', 'SGA_v2.0_scaffold175G39302' => 'sas', 'SGA_v2.0_scaffold1G00396' => 'sas', 'SGA_v2.0_scaffold2G01418' => 'sas', 'SGA_v2.0_scaffold36G14377' => 'sas', 'SGA_v2.0_scaffold49G18357' => 'sas', 'SGA_v2.0_scaffold57G20232' => 'sas', 'SGA_v2.0_scaffold599G53122' => 'sas', 'SGA_v2.0_scaffold86G26915' => 'sas', 'SHI00322' => 'shi', 'SHI06334' => 'shi', 'SHI16844' => 'shi', 'SMO133G0007' => 'smo', 'Solyc01g067550.3' => 'sly', 'Solyc03g111580.3' => 'sly', 'Solyc06g008740.3' => 'sly', 'Solyc06g054620.4' => 'sly', 'Solyc06g071860.3' => 'sly', 'Solyc09g074640.3' => 'sly', 'Solyc11g008900.2' => 'sly', 'Sopen01g029500' => 'spe', 'Sopen03g030700' => 'spe', 'Sopen06g003530' => 'spe', 'Sopen06g019680' => 'spe', 'Sopen06g028140' => 'spe', 'Sopen09g029520' => 'spe', 'Sopen11g004680' => 'spe', 'Sp1g03870' => 'spa', 'Sp2g26380' => 'spa', 'Sp3g01860' => 'spa', 'Sp3g05330' => 'spa', 'Sp4g15290' => 'spa', 'Sp4g29780' => 'spa', 'Sp5g13590' => 'spa', 'Sp5g18130' => 'spa', 'Sp6g25780' => 'spa', 'TAR362G0496' => 'tar', 'TAR362G0552' => 'tar', 'TAR365G0513' => 'tar', 'TAR371G0438' => 'tar', 'TAR374G0354' => 'tar', 'TAR392G0001' => 'tar', 'TAR622G0447' => 'tar', 'TAR622G0756' => 'tar', 'TAR624G0774' => 'tar', 'TAR626G0179' => 'tar', 'TAR627G0456' => 'tar', 'TAR629G3127' => 'tar', 'TAR633G0033' => 'tar', 'TAR633G0572' => 'tar', 'TAR633G2460' => 'tar', 'TAR636G0488' => 'tar', 'TAR636G3257' => 'tar', 'TAR636G3461' => 'tar', 'THA.LOC104798958' => 'tha', 'THA.LOC104801012' => 'tha', 'THA.LOC104802718' => 'tha', 'THA.LOC104802944' => 'tha', 'THA.LOC104803139' => 'tha', 'THA.LOC104808861' => 'tha', 'THA.LOC104816033' => 'tha', 'THA.LOC104817519' => 'tha', 'THA.LOC104818850' => 'tha', 'THA.LOC104826131' => 'tha', 'THA.LOC104827112' => 'tha', 'THA.LOC104827181' => 'tha', 'Thecc.01G183400' => 'tca', 'Thecc.01G293100' => 'tca', 'Thecc.03G121400' => 'tca', 'Thecc.04G026900' => 'tca', 'Thecc.04G280600' => 'tca', 'Thecc.05G200400' => 'tca', 'Thhalv10001399m.g' => 'esa', 'Thhalv10004204m.g' => 'esa', 'Thhalv10007912m.g' => 'esa', 'Thhalv10010405m.g' => 'esa', 'Thhalv10013460m.g' => 'esa', 'Thhalv10013743m.g' => 'esa', 'Thhalv10016979m.g' => 'esa', 'Thhalv10020686m.g' => 'esa', 'Thhalv10020900m.g' => 'esa', 'TPR.G14619' => 'tpr', 'TPR.G14647' => 'tpr', 'TPR.G25625' => 'tpr', 'TPR.G30345' => 'tpr', 'TPR.G33955' => 'tpr', 'TPR.G35517' => 'tpr', 'TPR.G37533' => 'tpr', 'TWI09G0389' => 'twi', 'TWI14G0537' => 'twi', 'TWI14G0800' => 'twi', 'TWI36G0270' => 'twi', 'TWI36G0920' => 'twi', 'TWI39G0384' => 'twi', 'TWI53G0507' => 'twi', 'TWI59G1193' => 'twi', 'TWI73G0244' => 'twi', 'TWI75G1052' => 'twi', 'TWI75G1597' => 'twi', 'unitig_0.g2601' => 'ugi', 'unitig_0.g2602' => 'ugi', 'unitig_22.g5903' => 'ugi', 'unitig_22.g5904' => 'ugi', 'unitig_26.g9923' => 'ugi', 'unitig_37.g12387' => 'ugi', 'unitig_46.g18684' => 'ugi', 'unitig_46.g18685' => 'ugi', 'unitig_749.g13505' => 'ugi', 'unitig_749.g13939' => 'ugi', 'unitig_88.g27716' => 'ugi', 'unitig_899.g14754' => 'ugi', 'vmacro02495' => 'vma', 'vmacro08112' => 'vma', 'vmacro09369' => 'vma', 'vmacro10408' => 'vma', 'vmacro12156' => 'vma', 'vmacro15249' => 'vma', 'vmacro16700' => 'vma', 'vmacro18307' => 'vma', 'vmacro19253' => 'vma', 'VMungo0540G0868' => 'vmu', 'VMungo0647G0042' => 'vmu', 'VMungo0720G0170' => 'vmu', 'VMungo0720G1879' => 'vmu', 'VMungo1215G1779' => 'vmu', 'VMungo1215G3297' => 'vmu', 'VMungo1309G1691' => 'vmu', 'VMungo1383G1432' => 'vmu', 'Zm00001eb090510' => 'zma', 'Zm00001eb127840' => 'zma', 'Zm00001eb127850' => 'zma', 'Zm00001eb143430' => 'zma', 'Zm00001eb169920' => 'zma', 'Zm00001eb333460' => 'zma', 'Zm00001eb333470' => 'zma', 'Zm00001eb364730' => 'zma', 'Zm00001eb408640' => 'zma' ) $gf_id = 'HOM05D000568' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000568' ) $data_identifier = 'HOM05D000568' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 35, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 19, 'amhyb' => (int) 6, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 35, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 6, 'cqu' => (int) 9, 'bca' => (int) 34, 'bol' => (int) 21, 'bra' => (int) 20, 'can' => (int) 9, 'cansat' => (int) 4, 'chi' => (int) 8, 'cru' => (int) 11, 'car' => (int) 8, 'cbr' => (int) 3, 'ccan' => (int) 7, 'cde' => (int) 9, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 4, 'col' => (int) 6, 'cpa' => (int) 5, 'cre' => (int) 1, 'csa' => (int) 4, 'camsi' => (int) 10, 'dca' => (int) 11, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 8, 'bvu' => (int) 6, 'egr' => (int) 7, 'fan' => (int) 21, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 34, 'gra' => (int) 17, 'vvi' => (int) 8, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 16, 'vpl' => (int) 7, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 11, 'lja' => (int) 8, 'lsa' => (int) 9, 'mes' => (int) 11, 'mpo' => (int) 1, 'mbi' => (int) 5, 'mdo' => (int) 24, 'mtr' => (int) 9, 'cme' => (int) 4, 'egut' => (int) 9, 'ama' => (int) 10, 'nta' => (int) 16, 'nnu' => (int) 8, 'oeu' => (int) 12, 'osa' => (int) 7, 'pax' => (int) 8, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 8, 'ptr' => (int) 9, 'ppa' => (int) 3, 'pco' => (int) 1, 'ppe' => (int) 10, 'psa' => (int) 7, 'pso' => (int) 14, 'qlo' => (int) 5, 'rch' => (int) 5, 'rsi' => (int) 12, 'sbr' => (int) 8, 'sbo' => (int) 6, 'sci' => (int) 8, 'sed' => (int) 8, 'sgi' => (int) 6, 'sas' => (int) 10, 'shi' => (int) 3, 'smo' => (int) 1, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 18, 'tha' => (int) 12, 'tca' => (int) 6, 'esa' => (int) 9, 'tpr' => (int) 7, 'twi' => (int) 11, 'ugi' => (int) 12, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 9 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb408640' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1